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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs13334740 chr16:8039058 G/A ABR chr17:906758-1132315:- -1.07 -7.62 5.03E-10 Box Plot
ACC rs13398896 chr2:67793236 T/C PRHOXNB chr13:28552243-28562774:- 0.59 8.31 4.11E-11 Box Plot
ACC rs1380864 chr8:113023707 C/A KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs138200666 chr2:16879620 G/GA TFDP3 chrX:132350697-132352376:- 1.07 8.47 2.33E-11 Box Plot
ACC rs138410467 chr9:108963398 G/T PRHOXNB chr13:28552243-28562774:- 0.6 7.94 1.59E-10 Box Plot
ACC rs138628578 chr18:37016622 T/C PRHOXNB chr13:28552243-28562774:- 0.6 7.92 1.68E-10 Box Plot
ACC rs138659119 chr18:37100512 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs138662028 chr8:74453487 C/CA PRHOXNB chr13:28552243-28562774:- 0.58 8.81 6.81E-12 Box Plot
ACC rs1387835 chr1:151954892 C/T EPGN chr4:75174190-75181024:+ 0.99 8.32 4.05E-11 Box Plot
ACC rs138786268 chr18:32670534 A/C PRHOXNB chr13:28552243-28562774:- 0.7 7.54 6.83E-10 Box Plot
ACC rs138800630 chr1:119666193 CTG/C PRHOXNB chr13:28552243-28562774:- 0.63 9.24 1.46E-12 Box Plot
ACC rs138940736 chr8:112909016 TCACCTTTCAC/T KRT6C chr12:52862300-52867569:- 0.76 9.02 3.28E-12 Box Plot
ACC rs139243148 chr3:128544985 T/C OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs139434466 chr1:169373833 C/T TFDP3 chrX:132350697-132352376:- 0.68 7.98 1.39E-10 Box Plot
ACC rs139468902 chr3:128548628 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot